Webgene symbol 是非常官方的,由HUGO 组织负责维护,有专门的数据库 HGNC database of human gene names HUGO. 以前分析数据的时候,有一些基因的symbol很奇怪,让我百思不得其解,比如: C orf 系列基因,. HS.系列基因,. KRTAP系列基因,. LOC系列基因,. MIR系列基因,. LINC系列 ... Webcytoband: Path of the cytoband file or a data frame that already contains cytoband data. species: Abbreviations of species. e.g. hg19 for human, mm10 for mouse. If this value is specified, the function will download cytoBand.txt.gz from UCSC website automatically. chromosome.index: subset of chromosomes, also used to reorder chromosomes. sort.chr
芯片探针到基因组区段坐标的映射 - 腾讯云开发者社区-腾讯云
http://muchong.com/t-10308950-1-authorid-1887475 WebCytoband. The Cytoband file format is used to define the chromosome ideograms for a reference genome, and/or as of version 2.11.0 to create a cytoband track. A cytoband file is a five-column tab-delimited text file. Each row of the file describes the position of a cytogenetic band. The columns in the file match the columns of the cytoBand table ... cystic hygroma fetus survival rate
使用bedtools根据染色体上的起止位置拿到基因symbol - 腾讯云 …
WebFeb 24, 2024 · cytoband file, 染色体条带文件. gene annotation file, 基因结构注释文件,支持bed, gtf, genePred 3种格式, alias file, 别名,当fasta文件和基因结构中的染色体名称 … WebDEBUG: Opening project temp.proj DEBUG: Loading annotation database cytoBand DEBUG: Loading annotation database gwasCatalog Annotation database cytoBand (version hg19_20111216) Description: Cyto Band Database type: range Number of records: 862 Number of distinct ranges: 862 Reference genome hg19: ['chr', 'begin', 'end'] Field: … WebAug 7, 2024 · 也就是说,差异基因这个时候是由affymetrix的芯片探针表示,然后作者注释到了基因组区段,也就是 1p34, 5q12这样的标识,行话叫做:cytoBand。 … cystic hygroma 11 week ultrasound